WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C55B7.5.1 Sequence Name  C55B7.5.1
Length (nt)  1595   Chromosome Location  I: 6494290-6496109
Chromosome . Primary Identifier  I Chromosome Location . Start  6494290
Chromosome Location . End  6496109 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C55B7.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016944 uri-1 C55B7.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C55B7.5 C55B7.5 1341   I: 6494329-6494361

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C55B7.5.1 6494290 6496109 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon16439   72   I: 6494290-6494361 Caenorhabditis elegans
Exon16440   114   I: 6494487-6494600 Caenorhabditis elegans
Exon16441   846   I: 6494644-6495489 Caenorhabditis elegans
Exon16443   563   I: 6495547-6496109 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C55B7.5.1 6494290 6496109 1

1 Sequence

Length
1595

1 Sequence Ontology Term

Identifier Name Description
transcript