WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C55B7.4a.1 Sequence Name  C55B7.4a.1
Length (nt)  1397   Chromosome Location  I: 6497436-6499560
Chromosome . Primary Identifier  I Chromosome Location . Start  6497436
Chromosome Location . End  6499560 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C55B7.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016943 acdh-1 C55B7.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C55B7.4a C55B7.4a 1284   I: 6497453-6497627

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C55B7.4a.1 6497436 6499560 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon16444   192   I: 6497436-6497627 Caenorhabditis elegans
Exon16445   101   I: 6497674-6497774 Caenorhabditis elegans
Exon16446   444   I: 6498082-6498525 Caenorhabditis elegans
Exon16449   97   I: 6498575-6498671 Caenorhabditis elegans
Exon16452   146   I: 6498717-6498862 Caenorhabditis elegans
Exon16455   138   I: 6498909-6499046 Caenorhabditis elegans
Exon16457   279   I: 6499282-6499560 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C55B7.4a.1 6497436 6499560 1

1 Sequence

Length
1397

1 Sequence Ontology Term

Identifier Name Description
transcript