WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C55B7.4b.1 Sequence Name  C55B7.4b.1
Length (nt)  1139   Chromosome Location  I: 6498085-6499552
Chromosome . Primary Identifier  I Chromosome Location . Start  6498085
Chromosome Location . End  6499552 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C55B7.4b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016943 acdh-1 C55B7.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C55B7.4b C55B7.4b 759   I: 6498085-6498525

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C55B7.4b.1 6498085 6499552 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon16448   441   I: 6498085-6498525 Caenorhabditis elegans
Exon16450   97   I: 6498575-6498671 Caenorhabditis elegans
Exon16453   330   I: 6498717-6499046 Caenorhabditis elegans
Exon16456   271   I: 6499282-6499552 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C55B7.4b.1 6498085 6499552 1

1 Sequence

Length
1139

1 Sequence Ontology Term

Identifier Name Description
transcript