WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C55B7.10.1 Sequence Name  C55B7.10.1
Length (nt)  1341   Chromosome Location  I: 6502167-6503909
Chromosome . Primary Identifier  I Chromosome Location . Start  6502167
Chromosome Location . End  6503909 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C55B7.10.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016946 C55B7.10 C55B7.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C55B7.10 C55B7.10 1110   I: 6502344-6502353

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C55B7.10.1 6502167 6503909 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon16464   187   I: 6502167-6502353 Caenorhabditis elegans
Exon16465   125   I: 6502408-6502532 Caenorhabditis elegans
Exon16466   164   I: 6502702-6502865 Caenorhabditis elegans
Exon16467   313   I: 6502907-6503219 Caenorhabditis elegans
Exon16468   135   I: 6503268-6503402 Caenorhabditis elegans
Exon16469   191   I: 6503447-6503637 Caenorhabditis elegans
Exon16470   226   I: 6503684-6503909 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C55B7.10.1 6502167 6503909 -1

1 Sequence

Length
1341

1 Sequence Ontology Term

Identifier Name Description
transcript