WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C55B7.2.1 Sequence Name  C55B7.2.1
Length (nt)  2070   Chromosome Location  I: 6507894-6511619
Chromosome . Primary Identifier  I Chromosome Location . Start  6507894
Chromosome Location . End  6511619 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C55B7.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001627 gly-2 C55B7.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C55B7.2 C55B7.2 2010   I: 6507908-6508109

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C55B7.2.1 6507894 6511619 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon16471   216   I: 6507894-6508109 Caenorhabditis elegans
Exon16472   82   I: 6508280-6508361 Caenorhabditis elegans
Exon16473   127   I: 6508431-6508557 Caenorhabditis elegans
Exon16474   156   I: 6508643-6508798 Caenorhabditis elegans
Exon16475   170   I: 6509007-6509176 Caenorhabditis elegans
Exon16476   138   I: 6509221-6509358 Caenorhabditis elegans
Exon16477   589   I: 6509430-6510018 Caenorhabditis elegans
Exon16478   114   I: 6510901-6511014 Caenorhabditis elegans
Exon16479   245   I: 6511095-6511339 Caenorhabditis elegans
Exon16480   233   I: 6511387-6511619 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C55B7.2.1 6507894 6511619 1

1 Sequence

Length
2070

1 Sequence Ontology Term

Identifier Name Description
transcript