WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C55B7.11.1 Sequence Name  C55B7.11.1
Length (nt)  1389   Chromosome Location  I: 6511614-6513830
Chromosome . Primary Identifier  I Chromosome Location . Start  6511614
Chromosome Location . End  6513830 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C55B7.11.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016947 C55B7.11 C55B7.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C55B7.11 C55B7.11 1050   I: 6511822-6511931

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C55B7.11.1 6511614 6513830 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon16482   318   I: 6511614-6511931 Caenorhabditis elegans
Exon16483   541   I: 6512618-6513158 Caenorhabditis elegans
Exon16485   112   I: 6513207-6513318 Caenorhabditis elegans
Exon16487   289   I: 6513362-6513650 Caenorhabditis elegans
Exon16489   129   I: 6513702-6513830 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C55B7.11.1 6511614 6513830 -1

1 Sequence

Length
1389

1 Sequence Ontology Term

Identifier Name Description
transcript