WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C55B7.12b.1 Sequence Name  C55B7.12b.1
Length (nt)  907   Chromosome Location  I: 6517529-6520918
Chromosome . Primary Identifier  I Chromosome Location . Start  6517529
Chromosome Location . End  6520918 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C55B7.12b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000483 che-1 C55B7.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C55B7.12b C55B7.12b 822   I: 6517575-6517755

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C55B7.12b.1 6517529 6520918 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon16500   227   I: 6517529-6517755 Caenorhabditis elegans
Exon16503   73   I: 6518326-6518398 Caenorhabditis elegans
Exon16506   185   I: 6518448-6518632 Caenorhabditis elegans
Exon16507   177   I: 6519058-6519234 Caenorhabditis elegans
Exon16509   137   I: 6519991-6520127 Caenorhabditis elegans
Exon16511   108   I: 6520811-6520918 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C55B7.12b.1 6517529 6520918 -1

1 Sequence

Length
907

1 Sequence Ontology Term

Identifier Name Description
transcript