WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C55B7.12a Sequence Name  C55B7.12a
Length (nt)  645   Chromosome Location  I: 6517575-6517755
Chromosome . Primary Identifier  I Chromosome Location . Start  6517575
Chromosome Location . End  6517755
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C55B7.12a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE34280 CHE-1, isoform a 24.1 214 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00043225
WBRNAi00003239
WBRNAi00030179
WBRNAi00082378
WBRNAi00078195
WBRNAi00095442

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C55B7.12a 6517575 6517755 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000483 che-1 C55B7.12 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:C55B7.12a 6517575 6517755 -1
CDS:C55B7.12a 6518326 6518398 -1
CDS:C55B7.12a 6518448 6518632 -1
CDS:C55B7.12a 6519991 6520127 -1
CDS:C55B7.12a 6520811 6520879 -1

1 Sequence

Length
645

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C55B7.12a.1 C55B7.12a.1 645   I: 6517575-6520879