WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T10E9.4.1 Sequence Name  T10E9.4.1
Length (nt)  2100   Chromosome Location  I: 6525045-6528689
Chromosome . Primary Identifier  I Chromosome Location . Start  6525045
Chromosome Location . End  6528689 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T10E9.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020414 T10E9.4 T10E9.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T10E9.4 T10E9.4 1950   I: 6525708-6525834

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T10E9.4.1 6525045 6528689 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon16516   85   I: 6525045-6525129 Caenorhabditis elegans
Exon16518   141   I: 6525694-6525834 Caenorhabditis elegans
Exon16520   147   I: 6526224-6526370 Caenorhabditis elegans
Exon16522   147   I: 6526414-6526560 Caenorhabditis elegans
Exon16524   237   I: 6526608-6526844 Caenorhabditis elegans
Exon16526   174   I: 6527136-6527309 Caenorhabditis elegans
Exon16528   498   I: 6527361-6527858 Caenorhabditis elegans
Exon16530   232   I: 6527977-6528208 Caenorhabditis elegans
Exon16532   439   I: 6528251-6528689 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T10E9.4.1 6525045 6528689 1

1 Sequence

Length
2100

1 Sequence Ontology Term

Identifier Name Description
transcript