WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T10E9.9b.1 Sequence Name  T10E9.9b.1
Length (nt)  1313   Chromosome Location  I: 6546617-6548675
Chromosome . Primary Identifier  I Chromosome Location . Start  6546617
Chromosome Location . End  6548675 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T10E9.9b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020419 acdh-4 T10E9.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T10E9.9b T10E9.9b 1158   I: 6546728-6546943

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T10E9.9b.1 6546617 6548675 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon16577   327   I: 6546617-6546943 Caenorhabditis elegans
Exon16580   146   I: 6546994-6547139 Caenorhabditis elegans
Exon16582   97   I: 6547188-6547284 Caenorhabditis elegans
Exon16584   444   I: 6547653-6548096 Caenorhabditis elegans
Exon16586   101   I: 6548327-6548427 Caenorhabditis elegans
Exon16587   198   I: 6548478-6548675 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T10E9.9b.1 6546617 6548675 -1

1 Sequence

Length
1313

1 Sequence Ontology Term

Identifier Name Description
transcript