WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F57B10.9 Sequence Name  F57B10.9
Length (nt)  1431   Chromosome Location  I: 6550686-6551020
Chromosome . Primary Identifier  I Chromosome Location . Start  6550686
Chromosome Location . End  6551020
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F57B10.9

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE30546 SPG-20 52.4 476 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00048826
WBRNAi00003844
WBRNAi00033013
WBRNAi00062280
WBRNAi00116493

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F57B10.9 6550686 6551020 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019006 spg-20 F57B10.9 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:F57B10.9 6550686 6551020 -1
CDS:F57B10.9 6551073 6551180 -1
CDS:F57B10.9 6551301 6551669 -1
CDS:F57B10.9 6551716 6551920 -1
CDS:F57B10.9 6552000 6552095 -1
CDS:F57B10.9 6552140 6552221 -1
CDS:F57B10.9 6552327 6552451 -1
CDS:F57B10.9 6552502 6552612 -1

1 Sequence

Length
1431

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F57B10.9.1 F57B10.9.1 1594   I: 6550536-6552625