WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F57B10.7.1 Sequence Name  F57B10.7.1
Length (nt)  2210   Chromosome Location  I: 6554729-6558665
Chromosome . Primary Identifier  I Chromosome Location . Start  6554729
Chromosome Location . End  6558665 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F57B10.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006607 tre-1 F57B10.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F57B10.7 F57B10.7 1704   I: 6554901-6554929

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F57B10.7.1 6554729 6558665 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon16613   201   I: 6554729-6554929 Caenorhabditis elegans
Exon16614   101   I: 6554975-6555075 Caenorhabditis elegans
Exon16615   224   I: 6555561-6555784 Caenorhabditis elegans
Exon16616   101   I: 6555830-6555930 Caenorhabditis elegans
Exon16617   93   I: 6555977-6556069 Caenorhabditis elegans
Exon16618   414   I: 6556691-6557104 Caenorhabditis elegans
Exon16619   304   I: 6557288-6557591 Caenorhabditis elegans
Exon16620   291   I: 6557636-6557926 Caenorhabditis elegans
Exon16621   481   I: 6558185-6558665 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F57B10.7.1 6554729 6558665 1

1 Sequence

Length
2210

1 Sequence Ontology Term

Identifier Name Description
transcript