WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F57B10.6.1 Sequence Name  F57B10.6.1
Length (nt)  2516   Chromosome Location  I: 6558694-6562346
Chromosome . Primary Identifier  I Chromosome Location . Start  6558694
Chromosome Location . End  6562346 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F57B10.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019004 xpg-1 F57B10.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F57B10.6 F57B10.6 2463   I: 6558700-6558787

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F57B10.6.1 6558694 6562346 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon16622   94   I: 6558694-6558787 Caenorhabditis elegans
Exon16623   239   I: 6558922-6559160 Caenorhabditis elegans
Exon16624   327   I: 6559623-6559949 Caenorhabditis elegans
Exon16625   84   I: 6560005-6560088 Caenorhabditis elegans
Exon16626   436   I: 6560346-6560781 Caenorhabditis elegans
Exon16627   474   I: 6560829-6561302 Caenorhabditis elegans
Exon16628   161   I: 6561353-6561513 Caenorhabditis elegans
Exon16629   132   I: 6561560-6561691 Caenorhabditis elegans
Exon16630   569   I: 6561778-6562346 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F57B10.6.1 6558694 6562346 1

1 Sequence

Length
2516

1 Sequence Ontology Term

Identifier Name Description
transcript