WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F57B10.4a.1 Sequence Name  F57B10.4a.1
Length (nt)  2229   Chromosome Location  I: 6566159-6568905
Chromosome . Primary Identifier  I Chromosome Location . Start  6566159
Chromosome Location . End  6568905 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F57B10.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019002 syp-6 F57B10.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F57B10.4a F57B10.4a 2076   I: 6566173-6566231

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F57B10.4a.1 6566159 6568905 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon16644   73   I: 6566159-6566231 Caenorhabditis elegans
Exon16646   74   I: 6566277-6566350 Caenorhabditis elegans
Exon16650   126   I: 6566397-6566522 Caenorhabditis elegans
Exon16654   389   I: 6566570-6566958 Caenorhabditis elegans
Exon16658   486   I: 6567002-6567487 Caenorhabditis elegans
Exon16662   145   I: 6567532-6567676 Caenorhabditis elegans
Exon16668   357   I: 6567832-6568188 Caenorhabditis elegans
Exon16670   300   I: 6568232-6568531 Caenorhabditis elegans
Exon16674   80   I: 6568580-6568659 Caenorhabditis elegans
Exon16680   199   I: 6568707-6568905 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F57B10.4a.1 6566159 6568905 1

1 Sequence

Length
2229

1 Sequence Ontology Term

Identifier Name Description
transcript