WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F57B10.4d.1 Sequence Name  F57B10.4d.1
Length (nt)  2221   Chromosome Location  I: 6566166-6568898
Chromosome . Primary Identifier  I Chromosome Location . Start  6566166
Chromosome Location . End  6568898 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F57B10.4d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019002 syp-6 F57B10.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F57B10.4d F57B10.4d 2082   I: 6566173-6566231

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F57B10.4d.1 6566166 6568898 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon16645   66   I: 6566166-6566231 Caenorhabditis elegans
Exon16649   74   I: 6566277-6566350 Caenorhabditis elegans
Exon16653   126   I: 6566397-6566522 Caenorhabditis elegans
Exon16657   389   I: 6566570-6566958 Caenorhabditis elegans
Exon16661   486   I: 6567002-6567487 Caenorhabditis elegans
Exon16665   145   I: 6567532-6567676 Caenorhabditis elegans
Exon16667   363   I: 6567826-6568188 Caenorhabditis elegans
Exon16671   300   I: 6568232-6568531 Caenorhabditis elegans
Exon16677   80   I: 6568580-6568659 Caenorhabditis elegans
Exon16679   192   I: 6568707-6568898 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F57B10.4d.1 6566166 6568898 1

1 Sequence

Length
2221

1 Sequence Ontology Term

Identifier Name Description
transcript