WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:D2092.7 Sequence Name  D2092.7
Length (nt)  1236   Chromosome Location  I: 6616304-6616393
Chromosome . Primary Identifier  I Chromosome Location . Start  6616304
Chromosome Location . End  6616393
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D2092.7

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE53704 TSP-19 47.3 411 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00043520
WBRNAi00003297

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:D2092.7 6616304 6616393 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006645 tsp-19 D2092.7 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:D2092.7 6616304 6616393 1
CDS:D2092.7 6616536 6616681 1
CDS:D2092.7 6616726 6616982 1
CDS:D2092.7 6617124 6617293 1
CDS:D2092.7 6617628 6617734 1
CDS:D2092.7 6617908 6618009 1
CDS:D2092.7 6618126 6618362 1
CDS:D2092.7 6618416 6618542 1

1 Sequence

Length
1236

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:D2092.7.1 D2092.7.1 1254   I: 6616304-6618560