WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:D2092.2.1 Sequence Name  D2092.2.1
Length (nt)  1476   Chromosome Location  I: 6625066-6626788
Chromosome . Primary Identifier  I Chromosome Location . Start  6625066
Chromosome Location . End  6626788 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D2092.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017064 ppfr-2 D2092.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:D2092.2 D2092.2 1137   I: 6625397-6625810

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:D2092.2.1 6625066 6626788 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon16781   745   I: 6625066-6625810 Caenorhabditis elegans
Exon16782   111   I: 6625867-6625977 Caenorhabditis elegans
Exon16783   185   I: 6626024-6626208 Caenorhabditis elegans
Exon16784   130   I: 6626258-6626387 Caenorhabditis elegans
Exon16786   144   I: 6626439-6626582 Caenorhabditis elegans
Exon16787   161   I: 6626628-6626788 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:D2092.2.1 6625066 6626788 -1

1 Sequence

Length
1476

1 Sequence Ontology Term

Identifier Name Description
transcript