WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:D2092.1c.1 Sequence Name  D2092.1c.1
Length (nt)  2482   Chromosome Location  I: 6629739-6634515
Chromosome . Primary Identifier  I Chromosome Location . Start  6629739
Chromosome Location . End  6634515 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D2092.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017063 mctp-1 D2092.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:D2092.1c D2092.1c 2313   I: 6629906-6629950

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:D2092.1c.1 6629739 6634515 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon16793   212   I: 6629739-6629950 Caenorhabditis elegans
Exon16796   312   I: 6630110-6630421 Caenorhabditis elegans
Exon16800   165   I: 6630529-6630693 Caenorhabditis elegans
Exon16804   126   I: 6630745-6630870 Caenorhabditis elegans
Exon16808   274   I: 6630913-6631186 Caenorhabditis elegans
Exon16812   142   I: 6631235-6631376 Caenorhabditis elegans
Exon16816   245   I: 6631672-6631916 Caenorhabditis elegans
Exon16820   250   I: 6632032-6632281 Caenorhabditis elegans
Exon16826   167   I: 6632625-6632791 Caenorhabditis elegans
Exon16829   223   I: 6632837-6633059 Caenorhabditis elegans
Exon16832   124   I: 6633182-6633305 Caenorhabditis elegans
Exon16835   34   I: 6634123-6634156 Caenorhabditis elegans
Exon16837   106   I: 6634213-6634318 Caenorhabditis elegans
Exon16838   102   I: 6634414-6634515 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:D2092.1c.1 6629739 6634515 -1

1 Sequence

Length
2482

1 Sequence Ontology Term

Identifier Name Description
transcript