WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZC581.3.1 Sequence Name  ZC581.3.1
Length (nt)  2254   Chromosome Location  I: 6651220-6655430
Chromosome . Primary Identifier  I Chromosome Location . Start  6651220
Chromosome Location . End  6655430 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC581.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022633 ZC581.3 ZC581.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC581.3 ZC581.3 2076   I: 6651271-6651330

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZC581.3.1 6651220 6655430 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon16851   111   I: 6651220-6651330 Caenorhabditis elegans
Exon16852   71   I: 6651877-6651947 Caenorhabditis elegans
Exon16853   57   I: 6651999-6652055 Caenorhabditis elegans
Exon16854   104   I: 6652102-6652205 Caenorhabditis elegans
Exon16856   226   I: 6652256-6652481 Caenorhabditis elegans
Exon16857   178   I: 6652542-6652719 Caenorhabditis elegans
Exon16858   180   I: 6653052-6653231 Caenorhabditis elegans
Exon16859   223   I: 6653276-6653498 Caenorhabditis elegans
Exon16860   494   I: 6653811-6654304 Caenorhabditis elegans
Exon16861   211   I: 6654776-6654986 Caenorhabditis elegans
Exon16862   399   I: 6655032-6655430 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZC581.3.1 6651220 6655430 1

1 Sequence

Length
2254

1 Sequence Ontology Term

Identifier Name Description
transcript