WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZC581.2.1 Sequence Name  ZC581.2.1
Length (nt)  1238   Chromosome Location  I: 6655608-6658371
Chromosome . Primary Identifier  I Chromosome Location . Start  6655608
Chromosome Location . End  6658371 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC581.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022632 ZC581.2 ZC581.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC581.2 ZC581.2 1029   I: 6655715-6655746

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZC581.2.1 6655608 6658371 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon16863   139   I: 6655608-6655746 Caenorhabditis elegans
Exon16864   121   I: 6655797-6655917 Caenorhabditis elegans
Exon16865   214   I: 6656131-6656344 Caenorhabditis elegans
Exon16866   185   I: 6656559-6656743 Caenorhabditis elegans
Exon16867   98   I: 6657029-6657126 Caenorhabditis elegans
Exon16868   163   I: 6657169-6657331 Caenorhabditis elegans
Exon16869   123   I: 6657375-6657497 Caenorhabditis elegans
Exon16870   70   I: 6657919-6657988 Caenorhabditis elegans
Exon16871   125   I: 6658247-6658371 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZC581.2.1 6655608 6658371 1

1 Sequence

Length
1238

1 Sequence Ontology Term

Identifier Name Description
transcript