WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZC581.1.1 Sequence Name  ZC581.1.1
Length (nt)  1192   Chromosome Location  I: 6663161-6665160
Chromosome . Primary Identifier  I Chromosome Location . Start  6663161
Chromosome Location . End  6665160 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC581.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022631 nekl-2 ZC581.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC581.1 ZC581.1 1074   I: 6663206-6663298

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZC581.1.1 6663161 6665160 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon16882   138   I: 6663161-6663298 Caenorhabditis elegans
Exon16883   148   I: 6663475-6663622 Caenorhabditis elegans
Exon16884   119   I: 6663670-6663788 Caenorhabditis elegans
Exon16885   196   I: 6663834-6664029 Caenorhabditis elegans
Exon16886   122   I: 6664074-6664195 Caenorhabditis elegans
Exon16887   100   I: 6664287-6664386 Caenorhabditis elegans
Exon16888   86   I: 6664433-6664518 Caenorhabditis elegans
Exon16889   283   I: 6664878-6665160 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZC581.1.1 6663161 6665160 1

1 Sequence

Length
1192

1 Sequence Ontology Term

Identifier Name Description
transcript