WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T23B3.4.1 Sequence Name  T23B3.4.1
Length (nt)  1422   Chromosome Location  I: 6687349-6691671
Chromosome . Primary Identifier  I Chromosome Location . Start  6687349
Chromosome Location . End  6691671 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T23B3.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020712 ckr-1 T23B3.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T23B3.4 T23B3.4 1266   I: 6687496-6687600

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T23B3.4.1 6687349 6691671 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon16968   252   I: 6687349-6687600 Caenorhabditis elegans
Exon16969   153   I: 6687647-6687799 Caenorhabditis elegans
Exon16970   123   I: 6688016-6688138 Caenorhabditis elegans
Exon16971   144   I: 6688482-6688625 Caenorhabditis elegans
Exon16972   83   I: 6688675-6688757 Caenorhabditis elegans
Exon16973   118   I: 6688802-6688919 Caenorhabditis elegans
Exon16974   156   I: 6689164-6689319 Caenorhabditis elegans
Exon16975   101   I: 6689370-6689470 Caenorhabditis elegans
Exon16976   183   I: 6690074-6690256 Caenorhabditis elegans
Exon16977   109   I: 6691563-6691671 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T23B3.4.1 6687349 6691671 -1

1 Sequence

Length
1422

1 Sequence Ontology Term

Identifier Name Description
transcript