WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:W02D3.8 Sequence Name  W02D3.8
Length (nt)  1650   Chromosome Location  I: 6734182-6734868
Chromosome . Primary Identifier  I Chromosome Location . Start  6734182
Chromosome Location . End  6734868
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W02D3.8

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE25134 SMG-5 64.2 549 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00094404
WBRNAi00054593
WBRNAi00004377
WBRNAi00008062
WBRNAi00094394
WBRNAi00085062

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:W02D3.8 6734182 6734868 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004883 smg-5 W02D3.8 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:W02D3.8 6734182 6734868 -1
CDS:W02D3.8 6734955 6735145 -1
CDS:W02D3.8 6735212 6735761 -1
CDS:W02D3.8 6735823 6735931 -1
CDS:W02D3.8 6736040 6736152 -1

1 Sequence

Length
1650

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:W02D3.8.1 W02D3.8.1 1813   I: 6734028-6736161