WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F08B6.3.1 Sequence Name  F08B6.3.1
Length (nt)  930   Chromosome Location  I: 6758181-6760179
Chromosome . Primary Identifier  I Chromosome Location . Start  6758181
Chromosome Location . End  6760179 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F08B6.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017240 calu-2 F08B6.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F08B6.3 F08B6.3 861   I: 6758238-6758487

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F08B6.3.1 6758181 6760179 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon17114   307   I: 6758181-6758487 Caenorhabditis elegans
Exon17115   211   I: 6758944-6759154 Caenorhabditis elegans
Exon17116   100   I: 6759323-6759422 Caenorhabditis elegans
Exon17117   104   I: 6759753-6759856 Caenorhabditis elegans
Exon17118   130   I: 6759922-6760051 Caenorhabditis elegans
Exon17119   78   I: 6760102-6760179 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F08B6.3.1 6758181 6760179 -1

1 Sequence

Length
930

1 Sequence Ontology Term

Identifier Name Description
transcript