WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C37A2.5b.1 Sequence Name  C37A2.5b.1
Length (nt)  2965   Chromosome Location  I: 6773976-6779910
Chromosome . Primary Identifier  I Chromosome Location . Start  6773976
Chromosome Location . End  6779910 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C37A2.5b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004111 pqn-21 C37A2.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C37A2.5b C37A2.5b 2421   I: 6774516-6774623

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C37A2.5b.1 6773976 6779910 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon17137   648   I: 6773976-6774623 Caenorhabditis elegans
Exon17141   116   I: 6774675-6774790 Caenorhabditis elegans
Exon17145   393   I: 6774837-6775229 Caenorhabditis elegans
Exon17149   295   I: 6775312-6775606 Caenorhabditis elegans
Exon17153   132   I: 6776405-6776536 Caenorhabditis elegans
Exon17157   100   I: 6776592-6776691 Caenorhabditis elegans
Exon17163   186   I: 6777197-6777382 Caenorhabditis elegans
Exon17169   299   I: 6777504-6777802 Caenorhabditis elegans
Exon17172   239   I: 6778516-6778754 Caenorhabditis elegans
Exon17176   204   I: 6778808-6779011 Caenorhabditis elegans
Exon17178   210   I: 6779438-6779647 Caenorhabditis elegans
Exon17179   143   I: 6779768-6779910 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C37A2.5b.1 6773976 6779910 -1

1 Sequence

Length
2965

1 Sequence Ontology Term

Identifier Name Description
transcript