WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C37A2.3.1 Sequence Name  C37A2.3.1
Length (nt)  1438   Chromosome Location  I: 6784868-6787139
Chromosome . Primary Identifier  I Chromosome Location . Start  6784868
Chromosome Location . End  6787139 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C37A2.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016491 acdh-5 C37A2.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C37A2.3 C37A2.3 1329   I: 6784908-6784926

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C37A2.3.1 6784868 6787139 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon17198   59   I: 6784868-6784926 Caenorhabditis elegans
Exon17199   318   I: 6785101-6785418 Caenorhabditis elegans
Exon17200   135   I: 6785750-6785884 Caenorhabditis elegans
Exon17201   353   I: 6785932-6786284 Caenorhabditis elegans
Exon17202   354   I: 6786521-6786874 Caenorhabditis elegans
Exon17203   219   I: 6786921-6787139 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C37A2.3.1 6784868 6787139 1

1 Sequence

Length
1438

1 Sequence Ontology Term

Identifier Name Description
transcript