WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K02F2.6.1 Sequence Name  K02F2.6.1
Length (nt)  2180   Chromosome Location  I: 6820517-6823093
Chromosome . Primary Identifier  I Chromosome Location . Start  6820517
Chromosome Location . End  6823093 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K02F2.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004778 ser-3 K02F2.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K02F2.6 K02F2.6 1833   I: 6820763-6820912

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K02F2.6.1 6820517 6823093 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon17279   396   I: 6820517-6820912 Caenorhabditis elegans
Exon17280   222   I: 6820961-6821182 Caenorhabditis elegans
Exon17281   325   I: 6821231-6821555 Caenorhabditis elegans
Exon17282   213   I: 6821608-6821820 Caenorhabditis elegans
Exon17283   453   I: 6821976-6822428 Caenorhabditis elegans
Exon17284   364   I: 6822476-6822839 Caenorhabditis elegans
Exon17285   207   I: 6822887-6823093 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K02F2.6.1 6820517 6823093 -1

1 Sequence

Length
2180

1 Sequence Ontology Term

Identifier Name Description
transcript