WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K02F2.1a.1 Sequence Name  K02F2.1a.1
Length (nt)  3039   Chromosome Location  I: 6838354-6843343
Chromosome . Primary Identifier  I Chromosome Location . Start  6838354
Chromosome Location . End  6843343 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K02F2.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001056 dpf-3 K02F2.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K02F2.1a K02F2.1a 2796   I: 6838354-6838527

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K02F2.1a.1 6838354 6843343 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

20 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon17300   174   I: 6838354-6838527 Caenorhabditis elegans
Exon17301   71   I: 6838574-6838644 Caenorhabditis elegans
Exon17303   147   I: 6838814-6838960 Caenorhabditis elegans
Exon17305   141   I: 6839004-6839144 Caenorhabditis elegans
Exon17307   292   I: 6839215-6839506 Caenorhabditis elegans
Exon17309   140   I: 6839555-6839694 Caenorhabditis elegans
Exon17311   246   I: 6839803-6840048 Caenorhabditis elegans
Exon17313   110   I: 6840117-6840226 Caenorhabditis elegans
Exon17315   70   I: 6840280-6840349 Caenorhabditis elegans
Exon17317   67   I: 6840395-6840461 Caenorhabditis elegans
Exon17319   125   I: 6840506-6840630 Caenorhabditis elegans
Exon17321   141   I: 6840692-6840832 Caenorhabditis elegans
Exon17323   214   I: 6841167-6841380 Caenorhabditis elegans
Exon17325   74   I: 6841429-6841502 Caenorhabditis elegans
Exon17327   126   I: 6841965-6842090 Caenorhabditis elegans
Exon17329   112   I: 6842141-6842252 Caenorhabditis elegans
Exon17331   147   I: 6842298-6842444 Caenorhabditis elegans
Exon17333   149   I: 6842499-6842647 Caenorhabditis elegans
Exon17335   112   I: 6842697-6842808 Caenorhabditis elegans
Exon17338   381   I: 6842963-6843343 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K02F2.1a.1 6838354 6843343 1

1 Sequence

Length
3039

1 Sequence Ontology Term

Identifier Name Description
transcript