WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H27M09.5.1 Sequence Name  H27M09.5.1
Length (nt)  1124   Chromosome Location  I: 6845177-6846959
Chromosome . Primary Identifier  I Chromosome Location . Start  6845177
Chromosome Location . End  6846959 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H27M09.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019248 H27M09.5 H27M09.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H27M09.5 H27M09.5 1026   I: 6845884-6846866

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H27M09.5.1 6845177 6846959 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon17343   84   I: 6845177-6845260 Caenorhabditis elegans
Exon17344   990   I: 6845877-6846866 Caenorhabditis elegans
Exon17346   50   I: 6846910-6846959 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H27M09.5.1 6845177 6846959 -1

1 Sequence

Length
1124

1 Sequence Ontology Term

Identifier Name Description
transcript