WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H27M09.3.1 Sequence Name  H27M09.3.1
Length (nt)  2044   Chromosome Location  I: 6847511-6849923
Chromosome . Primary Identifier  I Chromosome Location . Start  6847511
Chromosome Location . End  6849923 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H27M09.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019247 syp-4 H27M09.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H27M09.3 H27M09.3 1818   I: 6847594-6847659

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H27M09.3.1 6847511 6849923 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon17349   149   I: 6847511-6847659 Caenorhabditis elegans
Exon17350   97   I: 6847705-6847801 Caenorhabditis elegans
Exon17351   169   I: 6847848-6848016 Caenorhabditis elegans
Exon17352   284   I: 6848087-6848370 Caenorhabditis elegans
Exon17353   206   I: 6848426-6848631 Caenorhabditis elegans
Exon17354   580   I: 6848693-6849272 Caenorhabditis elegans
Exon17355   144   I: 6849319-6849462 Caenorhabditis elegans
Exon17356   415   I: 6849509-6849923 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H27M09.3.1 6847511 6849923 1

1 Sequence

Length
2044

1 Sequence Ontology Term

Identifier Name Description
transcript