WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T21G5.3.1 Sequence Name  T21G5.3.1
Length (nt)  2769   Chromosome Location  I: 6854478-6857536
Chromosome . Primary Identifier  I Chromosome Location . Start  6854478
Chromosome Location . End  6857536 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T21G5.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001598 glh-1 T21G5.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T21G5.3 T21G5.3 2292   I: 6854812-6854851

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T21G5.3.1 6854478 6857536 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon17372   374   I: 6854478-6854851 Caenorhabditis elegans
Exon17373   435   I: 6854909-6855343 Caenorhabditis elegans
Exon17374   75   I: 6855387-6855461 Caenorhabditis elegans
Exon17375   1251   I: 6855510-6856760 Caenorhabditis elegans
Exon17376   104   I: 6856809-6856912 Caenorhabditis elegans
Exon17377   182   I: 6856959-6857140 Caenorhabditis elegans
Exon17378   348   I: 6857189-6857536 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T21G5.3.1 6854478 6857536 1

1 Sequence

Length
2769

1 Sequence Ontology Term

Identifier Name Description
transcript