WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T21G5.6.4 Sequence Name  T21G5.6.4
Length (nt)  1196   Chromosome Location  I: 6862388-6870901
Chromosome . Primary Identifier  I Chromosome Location . Start  6862388
Chromosome Location . End  6870901 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T21G5.6.4

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00044898 let-383 T21G5.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T21G5.6 T21G5.6 273   I: 6868821-6868843

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T21G5.6.4 6862388 6870901 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon17386   70   I: 6862388-6862457 Caenorhabditis elegans
Exon17387   78   I: 6862942-6863019 Caenorhabditis elegans
Exon17390   86   I: 6863076-6863161 Caenorhabditis elegans
Exon17396   154   I: 6868690-6868843 Caenorhabditis elegans
Exon17400   136   I: 6869550-6869685 Caenorhabditis elegans
Exon17406   672   I: 6870230-6870901 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T21G5.6.4 6862388 6870901 1

1 Sequence

Length
1196

1 Sequence Ontology Term

Identifier Name Description
transcript