WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T21G5.5d Sequence Name  T21G5.5d
Length (nt)  1461   Chromosome Location  I: 6877740-6877801
Chromosome . Primary Identifier  I Chromosome Location . Start  6877740
Chromosome Location . End  6877801
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T21G5.5d

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE44744 ASD-2, isoform d 52.2 486 Caenorhabditis elegans
 

Other

22 RNAi

WormBase ID
WBRNAi00106783
WBRNAi00066080
WBRNAi00053760
WBRNAi00026349
WBRNAi00026348
WBRNAi00091841
WBRNAi00004251
WBRNAi00035772
WBRNAi00065410
WBRNAi00071008
WBRNAi00073281
WBRNAi00073280
WBRNAi00073282
WBRNAi00116644
WBRNAi00026350
WBRNAi00064408
WBRNAi00092394
WBRNAi00092396
WBRNAi00092395
WBRNAi00092398
WBRNAi00092397
WBRNAi00092389

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T21G5.5d 6877740 6877801 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006423 asd-2 T21G5.5 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:T21G5.5d 6877740 6877801 -1
CDS:T21G5.5d 6879005 6879204 -1
CDS:T21G5.5d 6879774 6880041 -1
CDS:T21G5.5d 6880590 6881001 -1
CDS:T21G5.5d 6881247 6881512 -1
CDS:T21G5.5d 6882932 6883112 -1
CDS:T21G5.5d 6888146 6888217 -1

1 Sequence

Length
1461

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T21G5.5d.2 T21G5.5d.2 2178   I: 6877059-6888253
Transcript:T21G5.5d.1 T21G5.5d.1 2230   I: 6877059-6892143