WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T21G5.5c.1 Sequence Name  T21G5.5c.1
Length (nt)  1577   Chromosome Location  I: 6878866-6882042
Chromosome . Primary Identifier  I Chromosome Location . Start  6878866
Chromosome Location . End  6882042 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T21G5.5c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006423 asd-2 T21G5.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T21G5.5c T21G5.5c 1338   I: 6878976-6879204

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T21G5.5c.1 6878866 6882042 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon17425   339   I: 6878866-6879204 Caenorhabditis elegans
Exon17431   268   I: 6879774-6880041 Caenorhabditis elegans
Exon17437   412   I: 6880590-6881001 Caenorhabditis elegans
Exon17443   266   I: 6881247-6881512 Caenorhabditis elegans
Exon17446   292   I: 6881751-6882042 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T21G5.5c.1 6878866 6882042 -1

1 Sequence

Length
1577

1 Sequence Ontology Term

Identifier Name Description
transcript