WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T21G5.5c Sequence Name  T21G5.5c
Length (nt)  1338   Chromosome Location  I: 6878976-6879204
Chromosome . Primary Identifier  I Chromosome Location . Start  6878976
Chromosome Location . End  6879204
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T21G5.5c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE37411 ASD-2, isoform c 47.8 445 Caenorhabditis elegans
 

Other

22 RNAi

WormBase ID
WBRNAi00106783
WBRNAi00066080
WBRNAi00053760
WBRNAi00026349
WBRNAi00026348
WBRNAi00091841
WBRNAi00004251
WBRNAi00035772
WBRNAi00065410
WBRNAi00071008
WBRNAi00073281
WBRNAi00073280
WBRNAi00073282
WBRNAi00116644
WBRNAi00026350
WBRNAi00064408
WBRNAi00092394
WBRNAi00092396
WBRNAi00092395
WBRNAi00092398
WBRNAi00092397
WBRNAi00092389

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T21G5.5c 6878976 6879204 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006423 asd-2 T21G5.5 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:T21G5.5c 6878976 6879204 -1
CDS:T21G5.5c 6879774 6880041 -1
CDS:T21G5.5c 6880590 6881001 -1
CDS:T21G5.5c 6881247 6881512 -1
CDS:T21G5.5c 6881751 6881913 -1

1 Sequence

Length
1338

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T21G5.5c.1 T21G5.5c.1 1577   I: 6878866-6882042