WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C48B6.2.1 Sequence Name  C48B6.2.1
Length (nt)  645   Chromosome Location  I: 6916766-6917561
Chromosome . Primary Identifier  I Chromosome Location . Start  6916766
Chromosome Location . End  6917561 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C48B6.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016740 C48B6.2 C48B6.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C48B6.2 C48B6.2 552   I: 6916784-6916887

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C48B6.2.1 6916766 6917561 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon17563   122   I: 6916766-6916887 Caenorhabditis elegans
Exon17564   55   I: 6916935-6916989 Caenorhabditis elegans
Exon17565   138   I: 6917046-6917183 Caenorhabditis elegans
Exon17566   330   I: 6917232-6917561 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C48B6.2.1 6916766 6917561 1

1 Sequence

Length
645

1 Sequence Ontology Term

Identifier Name Description
transcript