WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C48B6.9 Sequence Name  C48B6.9
Length (nt)  792   Chromosome Location  I: 6924420-6924610
Chromosome . Primary Identifier  I Chromosome Location . Start  6924420
Chromosome Location . End  6924610
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C48B6.9

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE08811 C48B6.9 29.0 263 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00042728
WBRNAi00003192
WBRNAi00029940
WBRNAi00061762
WBRNAi00062169

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C48B6.9 6924420 6924610 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016745 C48B6.9 C48B6.9 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:C48B6.9 6924420 6924610 -1
CDS:C48B6.9 6924709 6924794 -1
CDS:C48B6.9 6924850 6925133 -1
CDS:C48B6.9 6925181 6925342 -1
CDS:C48B6.9 6925391 6925459 -1

1 Sequence

Length
792

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C48B6.9.2 C48B6.9.2 1243   I: 6924282-6926383
Transcript:C48B6.9.1 C48B6.9.1 930   I: 6924288-6925465