WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T10B11.3.1 Sequence Name  T10B11.3.1
Length (nt)  1297   Chromosome Location  I: 6926257-6929665
Chromosome . Primary Identifier  I Chromosome Location . Start  6926257
Chromosome Location . End  6929665 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T10B11.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020399 ztf-4 T10B11.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T10B11.3 T10B11.3 1104   I: 6926309-6926318

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T10B11.3.1 6926257 6929665 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon17597   62   I: 6926257-6926318 Caenorhabditis elegans
Exon17598   166   I: 6926565-6926730 Caenorhabditis elegans
Exon17599   69   I: 6927101-6927169 Caenorhabditis elegans
Exon17600   106   I: 6927450-6927555 Caenorhabditis elegans
Exon17601   97   I: 6927662-6927758 Caenorhabditis elegans
Exon17602   136   I: 6927996-6928131 Caenorhabditis elegans
Exon17603   110   I: 6928483-6928592 Caenorhabditis elegans
Exon17604   105   I: 6928799-6928903 Caenorhabditis elegans
Exon17605   122   I: 6929038-6929159 Caenorhabditis elegans
Exon17606   324   I: 6929342-6929665 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T10B11.3.1 6926257 6929665 1

1 Sequence

Length
1297

1 Sequence Ontology Term

Identifier Name Description
transcript