WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T10B11.7b.1 Sequence Name  T10B11.7b.1
Length (nt)  1527   Chromosome Location  I: 6946349-6950121
Chromosome . Primary Identifier  I Chromosome Location . Start  6946349
Chromosome Location . End  6950121 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T10B11.7b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020403 hrde-4 T10B11.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T10B11.7b T10B11.7b 1527   I: 6946349-6946360

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T10B11.7b.1 6946349 6950121 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon17658   12   I: 6946349-6946360 Caenorhabditis elegans
Exon17660   173   I: 6946524-6946696 Caenorhabditis elegans
Exon17662   306   I: 6946755-6947060 Caenorhabditis elegans
Exon17664   292   I: 6947178-6947469 Caenorhabditis elegans
Exon17666   120   I: 6947517-6947636 Caenorhabditis elegans
Exon17668   302   I: 6947686-6947987 Caenorhabditis elegans
Exon17670   108   I: 6948298-6948405 Caenorhabditis elegans
Exon17672   160   I: 6949860-6950019 Caenorhabditis elegans
Exon17673   54   I: 6950068-6950121 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T10B11.7b.1 6946349 6950121 -1

1 Sequence

Length
1527

1 Sequence Ontology Term

Identifier Name Description
transcript