WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C30F12.5a.1 Sequence Name  C30F12.5a.1
Length (nt)  1581   Chromosome Location  I: 6992072-6999706
Chromosome . Primary Identifier  I Chromosome Location . Start  6992072
Chromosome Location . End  6999706 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C30F12.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016264 C30F12.5 C30F12.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C30F12.5a C30F12.5a 1158   I: 6992312-6992448

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C30F12.5a.1 6992072 6999706 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon17746   377   I: 6992072-6992448 Caenorhabditis elegans
Exon17749   254   I: 6992816-6993069 Caenorhabditis elegans
Exon17752   71   I: 6993463-6993533 Caenorhabditis elegans
Exon17753   108   I: 6993989-6994096 Caenorhabditis elegans
Exon17754   99   I: 6994147-6994245 Caenorhabditis elegans
Exon17755   81   I: 6994292-6994372 Caenorhabditis elegans
Exon17756   108   I: 6995398-6995505 Caenorhabditis elegans
Exon17757   82   I: 6995805-6995886 Caenorhabditis elegans
Exon17758   155   I: 6997539-6997693 Caenorhabditis elegans
Exon17759   246   I: 6999461-6999706 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C30F12.5a.1 6992072 6999706 -1

1 Sequence

Length
1581

1 Sequence Ontology Term

Identifier Name Description
transcript