WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:H06O01.3a Sequence Name  H06O01.3a
Length (nt)  1152   Chromosome Location  I: 7005720-7005781
Chromosome . Primary Identifier  I Chromosome Location . Start  7005720
Chromosome Location . End  7005781
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H06O01.3a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE17969 CTG-1, isoform a 43.8 383 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00049333
WBRNAi00003875
WBRNAi00033681
WBRNAi00116963

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:H06O01.3a 7005720 7005781 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010370 ctg-1 H06O01.3 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:H06O01.3a 7005720 7005781 1
CDS:H06O01.3a 7006830 7006992 1
CDS:H06O01.3a 7007248 7007433 1
CDS:H06O01.3a 7007715 7007872 1
CDS:H06O01.3a 7007916 7008003 1
CDS:H06O01.3a 7008244 7008491 1
CDS:H06O01.3a 7008774 7008940 1
CDS:H06O01.3a 7008987 7009066 1

1 Sequence

Length
1152

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:H06O01.3a.1 H06O01.3a.1 1563   I: 7005443-7009200