WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:H06O01.3c Sequence Name  H06O01.3c
Length (nt)  720   Chromosome Location  I: 7007736-7007872
Chromosome . Primary Identifier  I Chromosome Location . Start  7007736
Chromosome Location . End  7007872
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H06O01.3c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE47872 CTG-1, isoform c 27.5 239 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00049333
WBRNAi00003875
WBRNAi00033681
WBRNAi00116963

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:H06O01.3c 7007736 7007872 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010370 ctg-1 H06O01.3 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:H06O01.3c 7007736 7007872 1
CDS:H06O01.3c 7007916 7008003 1
CDS:H06O01.3c 7008244 7008491 1
CDS:H06O01.3c 7008774 7008940 1
CDS:H06O01.3c 7008987 7009066 1

1 Sequence

Length
720

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:H06O01.3c.1 H06O01.3c.1 720   I: 7007736-7009066