WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H06O01.1.1 Sequence Name  H06O01.1.1
Length (nt)  1702   Chromosome Location  I: 7015912-7020797
Chromosome . Primary Identifier  I Chromosome Location . Start  7015912
Chromosome Location . End  7020797 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H06O01.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003964 pdi-3 H06O01.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H06O01.1 H06O01.1 1467   I: 7016137-7016302

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H06O01.1.1 7015912 7020797 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon17794   391   I: 7015912-7016302 Caenorhabditis elegans
Exon17795   77   I: 7016354-7016430 Caenorhabditis elegans
Exon17797   229   I: 7016793-7017021 Caenorhabditis elegans
Exon17799   300   I: 7017101-7017400 Caenorhabditis elegans
Exon17801   114   I: 7017451-7017564 Caenorhabditis elegans
Exon17803   124   I: 7017621-7017744 Caenorhabditis elegans
Exon17805   226   I: 7017791-7018016 Caenorhabditis elegans
Exon17808   241   I: 7020557-7020797 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H06O01.1.1 7015912 7020797 -1

1 Sequence

Length
1702

1 Sequence Ontology Term

Identifier Name Description
transcript