WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F15C11.2c.1 Sequence Name  F15C11.2c.1
Length (nt)  1871   Chromosome Location  I: 7021972-7029076
Chromosome . Primary Identifier  I Chromosome Location . Start  7021972
Chromosome Location . End  7029076 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F15C11.2c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008852 ubql-1 F15C11.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F15C11.2c F15C11.2c 1365   I: 7021982-7022074

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F15C11.2c.1 7021972 7029076 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon17811   103   I: 7021972-7022074 Caenorhabditis elegans
Exon17816   106   I: 7022197-7022302 Caenorhabditis elegans
Exon17819   308   I: 7022348-7022655 Caenorhabditis elegans
Exon17823   129   I: 7022764-7022892 Caenorhabditis elegans
Exon17826   244   I: 7023457-7023700 Caenorhabditis elegans
Exon17829   140   I: 7024027-7024166 Caenorhabditis elegans
Exon17832   84   I: 7024212-7024295 Caenorhabditis elegans
Exon17835   113   I: 7024342-7024454 Caenorhabditis elegans
Exon17838   66   I: 7024502-7024567 Caenorhabditis elegans
Exon17841   112   I: 7024612-7024723 Caenorhabditis elegans
Exon17844   103   I: 7028563-7028665 Caenorhabditis elegans
Exon17847   363   I: 7028714-7029076 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F15C11.2c.1 7021972 7029076 1

1 Sequence

Length
1871

1 Sequence Ontology Term

Identifier Name Description
transcript