WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F15C11.2b.1 Sequence Name  F15C11.2b.1
Length (nt)  1760   Chromosome Location  I: 7021976-7029074
Chromosome . Primary Identifier  I Chromosome Location . Start  7021976
Chromosome Location . End  7029074 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F15C11.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008852 ubql-1 F15C11.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F15C11.2b F15C11.2b 1455   I: 7021982-7022074

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F15C11.2b.1 7021976 7029074 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon17812   99   I: 7021976-7022074 Caenorhabditis elegans
Exon17815   106   I: 7022197-7022302 Caenorhabditis elegans
Exon17817   99   I: 7022348-7022446 Caenorhabditis elegans
Exon17820   155   I: 7022501-7022655 Caenorhabditis elegans
Exon17822   129   I: 7022764-7022892 Caenorhabditis elegans
Exon17825   244   I: 7023457-7023700 Caenorhabditis elegans
Exon17828   140   I: 7024027-7024166 Caenorhabditis elegans
Exon17831   84   I: 7024212-7024295 Caenorhabditis elegans
Exon17834   113   I: 7024342-7024454 Caenorhabditis elegans
Exon17837   66   I: 7024502-7024567 Caenorhabditis elegans
Exon17840   61   I: 7024612-7024672 Caenorhabditis elegans
Exon17843   103   I: 7028563-7028665 Caenorhabditis elegans
Exon17846   361   I: 7028714-7029074 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F15C11.2b.1 7021976 7029074 1

1 Sequence

Length
1760

1 Sequence Ontology Term

Identifier Name Description
transcript