WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F15C11.2a.1 Sequence Name  F15C11.2a.1
Length (nt)  1808   Chromosome Location  I: 7021982-7029074
Chromosome . Primary Identifier  I Chromosome Location . Start  7021982
Chromosome Location . End  7029074 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F15C11.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008852 ubql-1 F15C11.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F15C11.2a F15C11.2a 1509   I: 7021982-7022074

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F15C11.2a.1 7021982 7029074 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon17813   93   I: 7021982-7022074 Caenorhabditis elegans
Exon17814   106   I: 7022197-7022302 Caenorhabditis elegans
Exon17818   308   I: 7022348-7022655 Caenorhabditis elegans
Exon17821   129   I: 7022764-7022892 Caenorhabditis elegans
Exon17824   244   I: 7023457-7023700 Caenorhabditis elegans
Exon17827   140   I: 7024027-7024166 Caenorhabditis elegans
Exon17830   84   I: 7024212-7024295 Caenorhabditis elegans
Exon17833   113   I: 7024342-7024454 Caenorhabditis elegans
Exon17836   66   I: 7024502-7024567 Caenorhabditis elegans
Exon17839   61   I: 7024612-7024672 Caenorhabditis elegans
Exon17842   103   I: 7028563-7028665 Caenorhabditis elegans
Exon17845   361   I: 7028714-7029074 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F15C11.2a.1 7021982 7029074 1

1 Sequence

Length
1808

1 Sequence Ontology Term

Identifier Name Description
transcript