WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F15C11.1.1 Sequence Name  F15C11.1.1
Length (nt)  2841   Chromosome Location  I: 7038900-7048832
Chromosome . Primary Identifier  I Chromosome Location . Start  7038900
Chromosome Location . End  7048832 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F15C11.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004773 sem-4 F15C11.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F15C11.1 F15C11.1 2235   I: 7038908-7038983

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F15C11.1.1 7038900 7048832 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon17852   84   I: 7038900-7038983 Caenorhabditis elegans
Exon17854   149   I: 7043685-7043833 Caenorhabditis elegans
Exon17855   99   I: 7044584-7044682 Caenorhabditis elegans
Exon17856   111   I: 7045068-7045178 Caenorhabditis elegans
Exon17857   316   I: 7045460-7045775 Caenorhabditis elegans
Exon17858   607   I: 7046016-7046622 Caenorhabditis elegans
Exon17859   141   I: 7047048-7047188 Caenorhabditis elegans
Exon17860   338   I: 7047257-7047594 Caenorhabditis elegans
Exon17861   108   I: 7047780-7047887 Caenorhabditis elegans
Exon17862   888   I: 7047945-7048832 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F15C11.1.1 7038900 7048832 1

1 Sequence

Length
2841

1 Sequence Ontology Term

Identifier Name Description
transcript