WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W01A8.1b.1 Sequence Name  W01A8.1b.1
Length (nt)  1717   Chromosome Location  I: 7057200-7059168
Chromosome . Primary Identifier  I Chromosome Location . Start  7057200
Chromosome Location . End  7059168 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W01A8.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007024 plin-1 W01A8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W01A8.1b W01A8.1b 1158   I: 7057208-7057303

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W01A8.1b.1 7057200 7059168 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon17899   104   I: 7057200-7057303 Caenorhabditis elegans
Exon17903   597   I: 7057358-7057954 Caenorhabditis elegans
Exon17908   78   I: 7058000-7058077 Caenorhabditis elegans
Exon17911   204   I: 7058133-7058336 Caenorhabditis elegans
Exon17915   102   I: 7058384-7058485 Caenorhabditis elegans
Exon17921   632   I: 7058537-7059168 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W01A8.1b.1 7057200 7059168 1

1 Sequence

Length
1717

1 Sequence Ontology Term

Identifier Name Description
transcript