WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F22D6.2.1 Sequence Name  F22D6.2.1
Length (nt)  1138   Chromosome Location  I: 7079868-7081520
Chromosome . Primary Identifier  I Chromosome Location . Start  7079868
Chromosome Location . End  7081520 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F22D6.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009050 mstr-1 F22D6.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F22D6.2 F22D6.2 570   I: 7080416-7080564

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F22D6.2.1 7079868 7081520 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon17963   697   I: 7079868-7080564 Caenorhabditis elegans
Exon17965   104   I: 7080641-7080744 Caenorhabditis elegans
Exon17967   166   I: 7080792-7080957 Caenorhabditis elegans
Exon17969   171   I: 7081350-7081520 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F22D6.2.1 7079868 7081520 -1

1 Sequence

Length
1138

1 Sequence Ontology Term

Identifier Name Description
transcript