WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F22D6.2 Sequence Name  F22D6.2
Length (nt)  570   Chromosome Location  I: 7080416-7080564
Chromosome . Primary Identifier  I Chromosome Location . Start  7080416
Chromosome Location . End  7080564
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F22D6.2

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE05683 MSTR-1 20.6 189 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00001211
WBRNAi00045315
WBRNAi00003426
WBRNAi00031270
WBRNAi00116923

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F22D6.2 7080416 7080564 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009050 mstr-1 F22D6.2 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:F22D6.2 7080416 7080564 -1
CDS:F22D6.2 7080641 7080744 -1
CDS:F22D6.2 7080792 7080957 -1
CDS:F22D6.2 7081350 7081500 -1

1 Sequence

Length
570

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F22D6.2.2 F22D6.2.2 1528   I: 7079562-7082040
Transcript:F22D6.2.1 F22D6.2.1 1138   I: 7079868-7081520